Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs17136535 chr7:29689158 C/T 5.22E-13 118 38.33 46.07 6 KM Plot
THYM rs17147338 chr4:70325886 C/T 1.54E-12 114 42.73 34.93 6 KM Plot
THYM rs17150665 chr7:29688860 T/G 5.22E-13 118 38.33 46.07 6 KM Plot
THYM rs17150667 chr7:29689338 G/T 5.22E-13 118 38.33 46.07 6 KM Plot
THYM rs17151970 chr10:12646813 A/G 0.000138 119 42.73 32.7 28.43 KM Plot
THYM rs1718107 chr12:121618762 A/G 2.86E-5 117 46.6 46.07 24.87 KM Plot
THYM rs1718108 chr12:121618665 G/A 2.86E-5 117 46.6 46.07 24.87 KM Plot
THYM rs1718119 chr12:121615103 G/A 2.06E-5 117 48 46.27 24.87 KM Plot
THYM rs1718130 chr12:121605954 G/A 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1718131 chr12:121606319 G/A 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1718132 chr12:121606350 G/T 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1718133 chr12:121607861 C/T 1.87E-5 119 46.6 46.27 23.9 KM Plot
THYM rs1718135 chr12:121607987 G/A 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1718136 chr12:121609608 A/G 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1718137 chr12:121609813 C/T 1.87E-5 118 46.6 46.27 24.87 KM Plot